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CAZyme Information: MGYG000001553_02492
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium_P mediterraneense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P mediterraneense | |||||||||||
| CAZyme ID | MGYG000001553_02492 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | Linear gramicidin synthase subunit D | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2229603; End: 2242475 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK12467 | PRK12467 | 0.0 | 325 | 1668 | 52 | 1426 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 14 | 2845 | 2288 | 5140 | peptide synthase; Provisional |
| PRK05691 | PRK05691 | 0.0 | 46 | 1617 | 373 | 1998 | peptide synthase; Validated |
| PRK12316 | PRK12316 | 0.0 | 2862 | 3865 | 51 | 1080 | peptide synthase; Provisional |
| PRK12467 | PRK12467 | 0.0 | 1819 | 3865 | 51 | 2159 | peptide synthase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QND46664.1 | 0.0 | 902 | 3847 | 75 | 2639 |
| BAY90071.1 | 2.13e-241 | 474 | 3846 | 296 | 3259 |
| BAY30132.1 | 5.28e-230 | 495 | 3846 | 318 | 3270 |
| BAZ00088.1 | 3.45e-228 | 495 | 3872 | 318 | 3295 |
| BAZ75991.1 | 3.45e-228 | 495 | 3872 | 318 | 3295 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6MFZ_A | 5.06e-294 | 2268 | 3856 | 204 | 1784 | Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis] |
| 6MFY_A | 2.96e-279 | 2268 | 3788 | 204 | 1714 | Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis] |
| 2VSQ_A | 9.34e-201 | 1812 | 2843 | 7 | 1041 | Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis] |
| 6MFW_A | 8.92e-179 | 2268 | 3263 | 204 | 1188 | Crystalstructure of a 4-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis] |
| 6MFX_A | 1.01e-177 | 2268 | 3263 | 204 | 1188 | Crystalstructure of a 4-domain construct of a mutant of LgrA in the substrate donation state [Brevibacillus parabrevis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P94459 | 0.0 | 1812 | 3874 | 5 | 2073 | Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsD PE=1 SV=2 |
| Q70LM4 | 0.0 | 18 | 3847 | 743 | 4649 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
| Q04747 | 0.0 | 1813 | 3867 | 5 | 2065 | Surfactin synthase subunit 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=srfAB PE=1 SV=3 |
| Q70LM5 | 0.0 | 18 | 3873 | 3343 | 7274 | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1 |
| P39847 | 0.0 | 13 | 1804 | 748 | 2545 | Plipastatin synthase subunit C OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999922 | 0.000106 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |