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CAZyme Information: MGYG000001560_01578

You are here: Home > Sequence: MGYG000001560_01578

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_01578
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1100 120596.6 4.1535
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 146921;  End: 150223  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_01578.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 41 456 7e-64 0.39805825242718446
GH106 506 1011 3.1e-63 0.5436893203883495

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 8.52e-41 173 805 328 873
alpha-L-rhamnosidase.
pfam02837 Glyco_hydro_2_N 0.003 922 1001 53 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 0.010 939 1001 113 177
cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AND79497.1 7.74e-156 44 1027 40 995
BBA95732.1 1.73e-146 47 1032 99 1057
QUW89009.1 2.58e-145 44 1032 55 1004
AIJ18091.1 3.61e-145 7 1032 14 1004
CAB55734.1 2.69e-144 7 1032 14 1004

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 2.43e-22 195 1007 408 1100
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 3.50e-10 219 1007 385 1059
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 7.91e-10 219 1007 385 1059
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000331 0.998945 0.000191 0.000204 0.000176 0.000150

TMHMM  Annotations      download full data without filtering help

start end
9 31
1076 1095