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CAZyme Information: MGYG000001560_01922

You are here: Home > Sequence: MGYG000001560_01922

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_01922
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1041 114907.8 4.1039
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 543362;  End: 546487  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_01922.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 41 950 3.4e-123 0.9490291262135923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.23e-38 190 738 335 869
alpha-L-rhamnosidase.
TIGR01167 LPXTG_anchor 0.002 1011 1040 3 32
LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other]
pfam00746 Gram_pos_anchor 0.005 1002 1040 1 40
LPXTG cell wall anchor motif.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTU60664.1 1.19e-130 37 976 41 951
QTU52635.1 1.19e-130 37 976 41 951
QTU44519.1 1.19e-130 37 976 41 951
CBG74689.1 1.19e-130 37 976 41 951
QFG20461.1 1.15e-129 42 976 49 976

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 2.21e-22 200 947 407 1100
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 6.37e-11 213 948 380 1060
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 1.44e-10 213 948 380 1060
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000298 0.999002 0.000232 0.000164 0.000157 0.000136

TMHMM  Annotations      download full data without filtering help

start end
12 31
1017 1036