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CAZyme Information: MGYG000001560_01946

You are here: Home > Sequence: MGYG000001560_01946

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_01946
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1225 135806.57 4.2587
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 574752;  End: 578429  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_01946.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 45 848 1.4e-72 0.8228155339805825

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 9.58e-14 216 708 354 804
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH71057.1 6.67e-201 40 1069 81 1130
AHF25191.1 3.21e-189 40 1067 57 1149
QGH70002.1 4.14e-150 17 1032 61 1094
QYN20448.1 1.11e-147 10 1047 15 1108
SDG73971.1 3.67e-130 41 1027 3 936

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 4.42e-06 43 691 29 623
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000330 0.998944 0.000165 0.000218 0.000170 0.000151

TMHMM  Annotations      download full data without filtering help

start end
12 34
1202 1219