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CAZyme Information: MGYG000001562_00707

You are here: Home > Sequence: MGYG000001562_00707

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_00707
CAZy Family GH33
CAZyme Description Sialidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
385 MGYG000001562_12|CGC2 42476.48 8.3942
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 108494;  End: 109651  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001562_00707.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH33 39 379 1.2e-89 0.9678362573099415

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd15482 Sialidase_non-viral 6.39e-99 39 382 1 339
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
pfam13088 BNR_2 4.52e-33 63 362 1 280
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG4409 NanH 6.82e-07 61 365 376 700
Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].
cd00260 Sialidase 9.90e-06 52 184 15 143
sialidases/neuraminidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed beta-propeller fold. This hierarchy includes eubacterial, eukaryotic, and viral sialidases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBD46002.1 5.62e-106 41 381 39 370
QDV16491.1 3.13e-102 40 384 40 379
QDT26944.1 6.26e-102 40 384 40 379
QDU50208.1 6.26e-102 40 384 40 379
QDT20890.1 2.51e-101 40 384 40 379

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4FJ6_A 5.06e-37 45 377 174 516
Crystalstructure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution [Parabacteroides distasonis ATCC 8503],4FJ6_B Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution [Parabacteroides distasonis ATCC 8503],4FJ6_C Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution [Parabacteroides distasonis ATCC 8503],4FJ6_D Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution [Parabacteroides distasonis ATCC 8503]
7P1B_C 6.74e-36 48 371 58 384
ChainC, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1D_A Chain A, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1E_A Chain A, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1F_A Chain A, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1F_B Chain B, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1O_A Chain A, Sialidase domain-containing protein [Aspergillus terreus NIH2624],7P1O_X Chain X, Sialidase domain-containing protein [Aspergillus terreus NIH2624]
6MNJ_A 1.62e-35 52 381 200 537
Hadzamicrobial sialidase Hz136 [Alistipes],6MNJ_B Hadza microbial sialidase Hz136 [Alistipes]
6MYV_A 1.18e-34 45 384 174 518
Sialidase26co-crystallized with DANA-Gc [bacterium],6MYV_B Sialidase26 co-crystallized with DANA-Gc [bacterium],6MYV_C Sialidase26 co-crystallized with DANA-Gc [bacterium],6MYV_D Sialidase26 co-crystallized with DANA-Gc [bacterium]
6MRV_A 1.53e-34 45 384 195 539
Sialidase26co-crystallized with DANA [bacterium],6MRV_B Sialidase26 co-crystallized with DANA [bacterium],6MRX_A Sialidase26 apo [bacterium],6MRX_B Sialidase26 apo [bacterium],6MRX_C Sialidase26 apo [bacterium],6MRX_D Sialidase26 apo [bacterium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O35657 4.40e-31 52 367 71 390
Sialidase-1 OS=Mus musculus OX=10090 GN=Neu1 PE=1 SV=1
A5PF10 4.88e-31 52 367 78 397
Sialidase-1 OS=Sus scrofa OX=9823 GN=NEU1 PE=3 SV=1
Q4WQS0 1.52e-30 48 384 54 393
Exo-alpha-sialidase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_4G13800 PE=1 SV=2
A6BMK7 1.74e-30 52 367 77 396
Sialidase-1 OS=Bos taurus OX=9913 GN=NEU1 PE=2 SV=2
Q99PW3 2.20e-30 52 367 71 390
Sialidase-1 OS=Rattus norvegicus OX=10116 GN=Neu1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.826329 0.173256 0.000107 0.000136 0.000091 0.000097

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_00707.