Species | Lacrimispora sp000526575 | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575 | |||||||||||
CAZyme ID | MGYG000001571_02559 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Endo-polygalacturonase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 53945; End: 55264 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 27 | 374 | 1.1e-69 | 0.9292307692307692 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 2.34e-57 | 2 | 302 | 82 | 396 | Polygalacturonase [Carbohydrate transport and metabolism]. |
PLN03010 | PLN03010 | 1.81e-24 | 2 | 380 | 46 | 385 | polygalacturonase |
pfam00295 | Glyco_hydro_28 | 1.69e-14 | 98 | 375 | 40 | 309 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02793 | PLN02793 | 2.36e-13 | 2 | 381 | 52 | 411 | Probable polygalacturonase |
PLN03003 | PLN03003 | 8.17e-13 | 4 | 355 | 25 | 343 | Probable polygalacturonase At3g15720 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QEH68079.1 | 6.68e-180 | 1 | 435 | 1 | 436 |
BCJ96758.1 | 4.43e-178 | 1 | 439 | 1 | 438 |
AXB29249.1 | 4.10e-140 | 1 | 401 | 1 | 401 |
CBL02678.1 | 8.22e-140 | 1 | 401 | 1 | 401 |
ANU45921.1 | 1.48e-121 | 1 | 401 | 1 | 396 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5OLP_A | 1.58e-29 | 3 | 367 | 45 | 423 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
3JUR_A | 7.20e-29 | 4 | 362 | 29 | 403 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
4MXN_A | 1.57e-18 | 3 | 245 | 22 | 235 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
2UVE_A | 3.63e-15 | 2 | 223 | 156 | 405 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
3ZPP_A | 2.60e-06 | 4 | 200 | 25 | 205 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 1.49e-29 | 4 | 259 | 64 | 314 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 3.40e-13 | 2 | 259 | 151 | 436 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
Q9LW07 | 3.32e-12 | 4 | 265 | 25 | 260 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
P49062 | 9.24e-11 | 2 | 260 | 51 | 303 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1 |
P35339 | 8.53e-09 | 3 | 255 | 41 | 290 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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