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CAZyme Information: MGYG000001571_02931
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lacrimispora sp000526575 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575 | |||||||||||
| CAZyme ID | MGYG000001571_02931 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 42018; End: 44381 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd14256 | Dockerin_I | 8.31e-21 | 730 | 785 | 2 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| pfam00404 | Dockerin_1 | 3.97e-18 | 730 | 785 | 1 | 56 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
| COG4193 | LytD | 1.29e-16 | 355 | 505 | 106 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| pfam08239 | SH3_3 | 1.38e-10 | 46 | 107 | 1 | 54 | Bacterial SH3 domain. |
| smart00287 | SH3b | 5.71e-10 | 38 | 103 | 1 | 62 | Bacterial SH3 domain homologues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRV21758.1 | 0.0 | 1 | 758 | 1 | 751 |
| ADL03932.1 | 0.0 | 1 | 758 | 1 | 751 |
| SET60659.1 | 0.0 | 1 | 764 | 1 | 748 |
| QJU23484.1 | 2.08e-223 | 1 | 622 | 1 | 705 |
| ASN95383.1 | 1.61e-222 | 1 | 622 | 1 | 705 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FXO_A | 1.21e-09 | 355 | 504 | 98 | 243 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 1.77e-09 | 376 | 488 | 108 | 212 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 2.39e-09 | 378 | 488 | 110 | 212 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8CPQ1 | 6.46e-09 | 355 | 504 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| O33635 | 1.46e-08 | 355 | 504 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 1.46e-08 | 355 | 504 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| Q99V41 | 4.28e-08 | 355 | 504 | 1102 | 1247 | Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1 |
| Q6GI31 | 4.28e-08 | 355 | 504 | 1111 | 1256 | Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001557 | 0.996963 | 0.000577 | 0.000444 | 0.000221 | 0.000190 |
