Species | Desulfovibrio sp900547595 | |||||||||||
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Lineage | Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio sp900547595 | |||||||||||
CAZyme ID | MGYG000001590_01517 | |||||||||||
CAZy Family | GT4 | |||||||||||
CAZyme Description | Vitamin B12 import ATP-binding protein BtuD | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 6169; End: 8262 Strand: + |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd03255 | ABC_MJ0796_LolCDE_FtsE | 1.73e-91 | 5 | 217 | 1 | 216 | ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane. |
COG1136 | LolD | 5.45e-91 | 4 | 217 | 1 | 218 | ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]. |
NF038007 | ABC_ATP_DarD | 3.99e-64 | 20 | 219 | 20 | 218 | darobactin export ABC transporter ATP-binding protein. |
TIGR03608 | L_ocin_972_ABC | 6.87e-60 | 20 | 214 | 13 | 206 | putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate] |
COG4181 | YbbA | 8.45e-59 | 2 | 217 | 4 | 222 | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport and catabolism]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AMD89422.1 | 0.0 | 1 | 656 | 1 | 655 |
ATD81516.1 | 4.34e-312 | 1 | 654 | 1 | 652 |
SPD34221.1 | 4.34e-312 | 1 | 654 | 1 | 652 |
QCC85257.1 | 4.81e-308 | 1 | 649 | 1 | 653 |
SFV72712.1 | 3.04e-306 | 1 | 654 | 1 | 648 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5XU1_A | 2.71e-47 | 1 | 226 | 13 | 240 | Structureof a non-canonical ABC transporter from Streptococcus pneumoniae R6 [Streptococcus pneumoniae R6],5XU1_B Structure of a non-canonical ABC transporter from Streptococcus pneumoniae R6 [Streptococcus pneumoniae R6] |
5LJ9_A | 4.55e-46 | 1 | 217 | 1 | 219 | Structureof the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJ9_B Structure of the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJ9_C Structure of the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJA_A Structure of the E. coli MacB ABC domain (P6122) [Escherichia coli K-12] |
1L2T_A | 1.85e-45 | 21 | 217 | 21 | 221 | ChainA, Hypothetical ABC transporter ATP-binding protein MJ0796 [Methanocaldococcus jannaschii],1L2T_B Chain B, Hypothetical ABC transporter ATP-binding protein MJ0796 [Methanocaldococcus jannaschii] |
3TIF_A | 2.43e-44 | 21 | 217 | 21 | 221 | Dimericstructure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi [Methanocaldococcus jannaschii DSM 2661],3TIF_B Dimeric structure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi [Methanocaldococcus jannaschii DSM 2661] |
2PCJ_A | 2.30e-43 | 1 | 217 | 1 | 215 | Crystalstructure of ABC transporter (aq_297) From Aquifex Aeolicus VF5 [Aquifex aeolicus VF5],2PCJ_B Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5 [Aquifex aeolicus VF5],2PCL_A Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5 [Aquifex aeolicus VF5] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q9WYI7 | 8.94e-53 | 1 | 217 | 1 | 219 | Uncharacterized ABC transporter ATP-binding protein TM_0352 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0352 PE=3 SV=1 |
O31711 | 2.09e-51 | 20 | 217 | 20 | 216 | Uncharacterized ABC transporter ATP-binding protein YknY OS=Bacillus subtilis (strain 168) OX=224308 GN=yknY PE=1 SV=1 |
O34979 | 5.40e-51 | 11 | 219 | 11 | 218 | Uncharacterized ABC transporter ATP-binding protein YvrO OS=Bacillus subtilis (strain 168) OX=224308 GN=yvrO PE=3 SV=2 |
Q3ATR5 | 6.85e-49 | 21 | 245 | 24 | 248 | Macrolide export ATP-binding/permease protein MacB OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=macB PE=3 SV=1 |
Q9A6Z7 | 2.55e-48 | 3 | 223 | 4 | 227 | Lipoprotein-releasing system ATP-binding protein LolD 2 OS=Caulobacter vibrioides (strain ATCC 19089 / CB15) OX=190650 GN=lolD2 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000063 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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