logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001603_01186

You are here: Home > Sequence: MGYG000001603_01186

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1370 sp900551135
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1370; UMGS1370 sp900551135
CAZyme ID MGYG000001603_01186
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
724 MGYG000001603_53|CGC1 74240.82 6.5155
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001603 2462371 MAG China Asia
Gene Location Start: 7545;  End: 9719  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001603_01186.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.03e-16 410 562 104 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 1.09e-09 52 113 1 54
Bacterial SH3 domain.
smart00287 SH3b 4.12e-07 44 109 1 58
Bacterial SH3 domain homologues.
pfam12733 Cadherin-like 1.24e-05 582 660 1 86
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.
PRK13914 PRK13914 6.33e-05 43 112 80 139
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJU23484.1 1.98e-228 1 690 1 700
ANU49989.1 2.60e-226 1 690 1 694
QQR01104.1 2.60e-226 1 690 1 694
ASN95383.1 3.53e-226 1 723 1 751
QRP39925.1 3.53e-226 1 723 1 751

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.02e-13 417 562 103 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q99V41 7.96e-12 417 562 1107 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 7.96e-12 417 562 1107 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q6GI31 7.98e-12 417 562 1116 1257
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
A7X0T9 7.98e-12 417 562 1114 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2
Q5HH31 7.98e-12 417 562 1115 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.091804 0.904782 0.002465 0.000437 0.000263 0.000224

TMHMM  Annotations      download full data without filtering help

start end
12 31