Species | Acidaminococcus sp900554515 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Acidaminococcus; Acidaminococcus sp900554515 | |||||||||||
CAZyme ID | MGYG000001612_00500 | |||||||||||
CAZy Family | GT83 | |||||||||||
CAZyme Description | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 79360; End: 81003 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT83 | 2 | 476 | 4.9e-101 | 0.8888888888888888 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1807 | ArnT | 1.64e-45 | 1 | 392 | 6 | 400 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
PRK13279 | arnT | 8.74e-41 | 1 | 367 | 1 | 372 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
pfam13231 | PMT_2 | 1.43e-20 | 59 | 195 | 1 | 137 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02366 | PMT | 9.54e-13 | 34 | 228 | 35 | 241 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
COG1928 | PMT1 | 9.66e-05 | 1 | 151 | 14 | 182 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ADB46704.1 | 1.75e-281 | 1 | 547 | 1 | 546 |
AEQ23377.1 | 1.74e-250 | 1 | 547 | 1 | 545 |
QTV78033.1 | 2.29e-129 | 1 | 527 | 1 | 521 |
AVO27725.1 | 9.18e-109 | 16 | 542 | 38 | 505 |
ADB46573.1 | 2.62e-108 | 4 | 546 | 17 | 501 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5EZM_A | 2.75e-29 | 31 | 326 | 59 | 359 | CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A0KGY4 | 1.46e-34 | 10 | 374 | 6 | 375 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=arnT PE=3 SV=1 |
C5BDQ8 | 3.86e-34 | 31 | 367 | 32 | 371 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=arnT PE=3 SV=1 |
A4SQX1 | 1.44e-32 | 25 | 374 | 24 | 375 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=arnT PE=3 SV=1 |
Q2NWA9 | 6.01e-31 | 10 | 330 | 8 | 333 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 1 OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=arnT1 PE=3 SV=1 |
Q4K884 | 2.41e-30 | 31 | 366 | 65 | 402 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=arnT2 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.982756 | 0.016534 | 0.000566 | 0.000041 | 0.000032 | 0.000091 |
start | end |
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5 | 27 |
61 | 78 |
80 | 99 |
109 | 131 |
136 | 153 |
168 | 190 |
203 | 225 |
257 | 279 |
292 | 309 |
313 | 332 |
344 | 361 |
376 | 393 |
400 | 422 |
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