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CAZyme Information: MGYG000001615_05064

You are here: Home > Sequence: MGYG000001615_05064

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eisenbergiella sp900548905
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eisenbergiella; Eisenbergiella sp900548905
CAZyme ID MGYG000001615_05064
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
309 34270.54 6.704
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001615 6842156 MAG China Asia
Gene Location Start: 15562;  End: 16491  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001615_05064.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 17 267 2.7e-55 0.6461538461538462

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.10e-44 11 285 233 500
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.11e-21 11 285 80 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 6.34e-17 10 210 132 307
Probable polygalacturonase At3g15720
PLN03010 PLN03010 4.76e-14 18 244 159 356
polygalacturonase
PLN02793 PLN02793 5.93e-11 73 261 226 393
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIQ57019.1 4.77e-127 5 294 219 508
AIQ45845.1 8.53e-125 5 294 220 509
AEI40562.1 7.06e-123 7 296 178 467
AIQ51483.1 2.16e-122 5 293 220 508
AFC29187.1 2.67e-122 7 296 221 510

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.57e-28 23 299 197 444
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.92e-26 19 287 203 452
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
6KVE_A 3.52e-12 25 240 117 299
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]
6KVH_A 3.52e-12 25 240 117 299
ChainA, endo-polygalacturonase [Evansstolkia leycettana]
7E56_A 1.11e-11 25 180 109 250
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 9.26e-25 27 260 210 422
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 7.28e-21 11 251 12 249
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q9LW07 1.04e-16 10 205 132 302
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q9FY19 2.66e-13 18 260 186 399
Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1
Q9P4W4 3.10e-10 25 240 141 323
Endopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgaA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001615_05064.