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CAZyme Information: MGYG000001692_00240

You are here: Home > Sequence: MGYG000001692_00240

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aeromonas dhakensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Aeromonadaceae; Aeromonas; Aeromonas dhakensis
CAZyme ID MGYG000001692_00240
CAZy Family GT104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
403 45695.93 5.026
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001692 4914725 Isolate not provided not provided
Gene Location Start: 213457;  End: 214668  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT104 10 401 2.4e-122 0.9683377308707124

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR03837 EarP 0.0 10 400 1 371
Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P.
pfam10093 DUF2331 0.0 10 400 1 373
Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function.
COG4394 EarP 8.88e-127 10 400 4 366
Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHV34243.1 3.58e-305 1 403 1 403
QSR42472.1 1.03e-304 1 403 1 403
ASX11018.1 1.46e-304 1 403 1 403
QKG00644.1 6.93e-303 1 403 1 403
QSR54978.1 4.01e-302 1 403 1 403

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5NV8_A 9.24e-109 6 403 14 390
Structuralbasis for EarP-mediated arginine glycosylation of translation elongation factor EF-P [Pseudomonas putida KT2440]
6J7M_A 5.10e-104 10 398 23 390
Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1]
6J7L_A 6.56e-104 10 398 23 390
Crystalstructure of Pseudomonas aeruginosa Earp in complex with TDP [Pseudomonas aeruginosa PAO1]
6J7J_A 7.43e-103 10 398 23 390
Crystalstructure of Pseudomonas aeruginosa Earp [Pseudomonas aeruginosa PAO1],6J7K_A Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha [Pseudomonas aeruginosa PAO1]
5WXI_A 1.14e-64 6 401 4 377
EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8EEP8 6.23e-113 10 401 10 394
Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1
Q88LS1 9.44e-108 10 403 5 377
Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1
Q9HZZ1 1.53e-103 10 398 4 371
Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1
E6MVV9 6.25e-64 6 401 4 377
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1
A0A0T7AQA7 2.23e-60 6 401 4 377
Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001692_00240.