dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001703_03669

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Species

Vibrio fluvialis

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio fluvialis

CAZyme ID

MGYG000001703_03669

CAZy Family

GH73

CAZyme Description

Peptidoglycan hydrolase FlgJ

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
314		34574.25	4.7253

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001703	4750671	Isolate	Bangladesh	Asia

Gene Location

Start: 7507; End: 8451 Strand: -

No EC number prediction in MGYG000001703_03669.

Family	Start	End	Evalue	family coverage
GH73	172	307	6.1e-33	0.953125

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05684	flgJ	5.16e-138	1	311	1	300	flagellar assembly peptidoglycan hydrolase FlgJ.
TIGR02541	flagell_FlgJ	1.68e-109	10	309	1	294	flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
PRK12709	flgJ	1.00e-56	3	308	5	319	flagellar rod assembly protein/muramidase FlgJ; Provisional
PRK12712	flgJ	6.98e-55	10	308	16	342	flagellar rod assembly protein/muramidase FlgJ; Provisional
PRK12713	flgJ	4.98e-54	11	308	16	326	flagellar rod assembly protein/muramidase FlgJ; Provisional

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AMF93746.1	4.42e-220	1	314	1	314
QKE34945.1	8.54e-218	1	314	1	314
QTH09460.1	3.48e-217	1	314	1	314
QUF68136.1	4.94e-217	1	314	1	314
QTH05458.1	7.01e-217	1	314	1	314

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3VWO_A	2.96e-33	164	304	2	142	Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]
2ZYC_A	3.82e-33	164	304	3	143	ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1]
3K3T_A	2.92e-32	164	304	3	143	E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1]
5DN4_A	8.75e-27	166	313	6	153	Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5DN5_A	2.25e-26	166	311	6	151	Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9KQ15	2.58e-146	1	312	1	310	Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2
Q9X9J3	2.86e-132	1	311	1	308	Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flgJ PE=3 SV=1
Q9I4P4	9.93e-48	7	309	14	386	Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1
P15931	2.46e-40	13	313	14	302	Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1
P75942	5.09e-38	13	313	14	299	Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000038	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000001703_03669.