Species | Coprococcus sp900548215 | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Coprococcus; Coprococcus sp900548215 | |||||||||||
CAZyme ID | MGYG000001745_01290 | |||||||||||
CAZy Family | GH25 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 166721; End: 169306 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH25 | 118 | 306 | 1.2e-45 | 0.9943502824858758 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd06414 | GH25_LytC-like | 1.33e-70 | 116 | 317 | 2 | 191 | The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains. LytC is composed of a C-terminal glycosyl hydrolase family 25 (GH25) domain and an N-terminal choline-binding module (CBM) consisting of eleven homologous repeats that specifically recognizes the choline residues of pneumococcal lipoteichoic and teichoic acids. This domain arrangement is the reverse of the major pneumococcal autolysin, LytA, and the CPL-1-like lytic enzymes of the pneumococcal bacteriophages, in which the CBM (consisting of six repeats) is at the C-terminus. This model represents the C-terminal catalytic domain of the LytC-like enzymes. |
cd00599 | GH25_muramidase | 8.53e-33 | 116 | 314 | 1 | 184 | Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity. |
pfam01183 | Glyco_hydro_25 | 5.47e-29 | 118 | 306 | 1 | 180 | Glycosyl hydrolases family 25. |
cd06525 | GH25_Lyc-like | 9.85e-26 | 116 | 315 | 1 | 183 | Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. |
COG3757 | Acm | 2.20e-19 | 103 | 314 | 50 | 251 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family [Cell wall/membrane/envelope biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CBK82808.1 | 0.0 | 1 | 860 | 1 | 859 |
CBK82807.1 | 7.66e-127 | 13 | 288 | 11 | 289 |
CCO05379.1 | 8.77e-83 | 76 | 855 | 65 | 818 |
QNL98623.1 | 2.89e-62 | 102 | 336 | 35 | 270 |
BAK47549.1 | 1.64e-49 | 118 | 604 | 206 | 673 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
2WW5_A | 2.01e-11 | 116 | 310 | 270 | 462 | 3D-structureof the modular autolysin LytC from Streptococcus pneumoniae at 1.6 A resolution [Streptococcus pneumoniae R6],2WWD_A 3D-structure of the modular autolysin LytC from Streptococcus pneumoniae in complex with pneummococcal peptidoglycan fragment [Streptococcus pneumoniae R6] |
2WWC_A | 4.66e-11 | 116 | 310 | 270 | 462 | 3D-structureof the modular autolysin LytC from Streptococcus pneumoniae in complex with synthetic peptidoglycan ligand [Streptococcus pneumoniae R6] |
6TPW_A | 1.68e-07 | 317 | 626 | 11 | 323 | Crystalstructures of FNIII domain one through four of the human leucocyte common antigen-related protein (LAR) [Homo sapiens] |
4YH7_A | 8.13e-07 | 321 | 544 | 303 | 532 | Crystalstructure of PTPdelta ectodomain in complex with IL1RAPL1 [Mus musculus] |
7MRO_A | 2.60e-06 | 321 | 614 | 7 | 306 | ChainA, Contactin-4 [Danio rerio],7MRS_A Chain A, Contactin-4 [Danio rerio] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P50899 | 6.58e-13 | 404 | 710 | 695 | 993 | Exoglucanase B OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cbhB PE=1 SV=1 |
A4IFW2 | 5.23e-10 | 321 | 626 | 320 | 627 | Receptor-type tyrosine-protein phosphatase F OS=Danio rerio OX=7955 GN=ptprf PE=2 SV=1 |
Q60847 | 2.82e-07 | 324 | 676 | 817 | 1157 | Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 |
Q8AV58 | 2.38e-06 | 323 | 678 | 1128 | 1507 | Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1 |
Q99715 | 3.22e-06 | 324 | 676 | 817 | 1157 | Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000615 | 0.998442 | 0.000322 | 0.000240 | 0.000182 | 0.000159 |
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