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CAZyme Information: MGYG000001747_01573

You are here: Home > Sequence: MGYG000001747_01573

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS743 sp900545085
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Christensenellaceae; UMGS743; UMGS743 sp900545085
CAZyme ID MGYG000001747_01573
CAZy Family GT39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1264 141143.14 7.2468
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001747 1884460 MAG Sweden Europe
Gene Location Start: 10808;  End: 14602  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001747_01573.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT39 852 1074 1.1e-51 0.9282511210762332

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5542 COG5542 2.13e-20 250 623 38 401
Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism].
pfam16192 PMT_4TMC 3.25e-20 1083 1260 1 198
C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.
COG1928 PMT1 4.97e-19 1082 1262 498 693
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].
pfam02366 PMT 1.42e-13 857 1074 22 241
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
COG4346 COG4346 1.93e-12 868 1209 122 404
Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYH39702.1 2.43e-240 223 1263 13 1073
ASA25569.1 1.33e-202 20 1262 24 1266
QSF45552.1 4.45e-201 20 1262 24 1271
QWT55655.1 3.06e-200 39 1262 29 1251
AIQ62339.1 1.97e-197 1 1262 6 1269

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
L8F4Z2 7.36e-24 858 1262 67 515
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1
P9WN04 9.99e-22 858 1262 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2
P9WN05 9.99e-22 858 1262 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2
Q8NRZ6 1.19e-18 879 1262 97 519
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.998976 0.000195 0.000195 0.000182 0.000160

TMHMM  Annotations      download full data without filtering help

start end
215 237
250 269
336 354
367 389
416 438
451 470
485 507
520 542
568 585
592 611
621 643
692 714
900 922
946 968
996 1018
1049 1071
1134 1156
1169 1188
1192 1211
1224 1246