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CAZyme Information: MGYG000001783_00046

You are here: Home > Sequence: MGYG000001783_00046

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900551065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900551065
CAZyme ID MGYG000001783_00046
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 MGYG000001783_1|CGC3 51284.18 5.8336
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001783 3080501 MAG Denmark Europe
Gene Location Start: 59813;  End: 61213  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001783_00046.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 51 401 2.1e-66 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.05e-60 26 307 82 390
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02188 PLN02188 6.51e-23 22 377 32 354
polygalacturonase/glycoside hydrolase family protein
PLN03010 PLN03010 2.46e-22 26 374 46 379
polygalacturonase
PLN02218 PLN02218 4.15e-22 28 313 69 343
polygalacturonase ADPG
PLN02793 PLN02793 4.70e-19 26 333 52 339
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY36938.1 3.83e-262 2 463 6 467
ALJ60362.1 3.06e-249 1 455 1 457
QUT88631.1 8.77e-249 1 455 1 457
QDO68557.1 2.05e-247 1 463 1 465
QEW34965.1 2.01e-238 1 463 1 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 3.36e-21 27 277 45 319
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.13e-19 28 241 29 270
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 1.73e-13 21 234 151 405
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4C2L_A 5.29e-11 34 277 23 250
Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2PYG_A 3.47e-07 27 67 3 43
Azotobactervinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYG_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYH_A Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii],2PYH_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.74e-24 28 270 64 314
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q8RY29 1.01e-18 28 238 69 271
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P35339 9.10e-18 21 236 35 238
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
P35338 2.20e-17 21 236 35 238
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 2.29e-16 21 236 35 238
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000073 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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