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CAZyme Information: MGYG000001802_01223
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Megasphaera sp900548635 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Megasphaeraceae; Megasphaera; Megasphaera sp900548635 | |||||||||||
| CAZyme ID | MGYG000001802_01223 | |||||||||||
| CAZy Family | GH170 | |||||||||||
| CAZyme Description | Ribosomal RNA large subunit methyltransferase K/L | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7766; End: 8707 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH170 | 3 | 309 | 2.2e-86 | 0.8342857142857143 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam19200 | DUF871_N | 2.10e-66 | 8 | 187 | 61 | 235 | DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown. |
| COG3589 | COG3589 | 4.50e-58 | 43 | 310 | 90 | 357 | Uncharacterized protein [Function unknown]. |
| pfam05913 | DUF871 | 1.01e-35 | 196 | 310 | 1 | 116 | Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown. |
| PRK11783 | rlmL | 7.58e-12 | 2 | 40 | 143 | 181 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL. |
| COG0116 | RlmL | 8.05e-12 | 2 | 43 | 145 | 186 | 23S rRNA G2445 N2-methylase RlmL [Translation, ribosomal structure and biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVO27179.1 | 7.95e-174 | 39 | 313 | 86 | 360 |
| ALG41767.1 | 1.13e-173 | 39 | 313 | 86 | 360 |
| CCC72923.1 | 4.58e-173 | 39 | 313 | 86 | 360 |
| AVO74354.1 | 4.58e-173 | 39 | 313 | 86 | 360 |
| AXL21107.1 | 1.82e-107 | 40 | 313 | 87 | 360 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2P0O_A | 2.34e-37 | 8 | 307 | 65 | 355 | Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583] |
| 1X7F_A | 1.57e-29 | 41 | 307 | 113 | 381 | Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579] |
| 3V8V_A | 5.15e-07 | 2 | 40 | 143 | 181 | Crystalstructure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAM binding [Escherichia coli K-12],3V8V_B Crystal structure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAM binding [Escherichia coli K-12] |
| 3V97_A | 5.15e-07 | 2 | 40 | 144 | 182 | Crystalstructure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAH binding [Escherichia coli K-12],3V97_B Crystal structure of bifunctional methyltransferase YcbY (RlmLK) from Escherichia coli, SAH binding [Escherichia coli K-12] |
| 3LDU_A | 1.60e-06 | 2 | 40 | 149 | 187 | ChainA, Putative methylase [Clostridioides difficile 630] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A0A0H2XHV5 | 2.65e-21 | 60 | 310 | 99 | 344 | 6-phospho-N-acetylmuramidase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=mupG PE=1 SV=1 |
| A9MHU0 | 1.59e-06 | 2 | 40 | 143 | 181 | Ribosomal RNA large subunit methyltransferase K/L OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=rlmL PE=3 SV=1 |
| Q0TJB3 | 2.82e-06 | 2 | 40 | 143 | 181 | Ribosomal RNA large subunit methyltransferase K/L OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=rlmL PE=3 SV=1 |
| Q31YL1 | 2.82e-06 | 2 | 40 | 143 | 181 | Ribosomal RNA large subunit methyltransferase K/L OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=rlmL PE=3 SV=1 |
| Q1RDR6 | 2.82e-06 | 2 | 40 | 143 | 181 | Ribosomal RNA large subunit methyltransferase K/L OS=Escherichia coli (strain UTI89 / UPEC) OX=364106 GN=rlmL PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000072 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |