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CAZyme Information: MGYG000001831_01077

You are here: Home > Sequence: MGYG000001831_01077

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species TF01-11 sp000436755
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; TF01-11; TF01-11 sp000436755
CAZyme ID MGYG000001831_01077
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
566 64574.44 6.3969
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001831 3856267 MAG Denmark Europe
Gene Location Start: 17249;  End: 18949  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001831_01077.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 309 554 6.9e-36 0.7702702702702703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 4.19e-55 266 560 12 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 7.13e-33 272 561 120 419
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 1.53e-23 328 557 79 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
smart00636 Glyco_18 4.96e-22 287 551 33 333
Glyco_18 domain.
pfam00704 Glyco_hydro_18 5.93e-22 316 551 73 306
Glycosyl hydrolases family 18.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCN32821.1 3.45e-184 2 563 4 564
BCJ96722.1 6.76e-174 26 563 28 566
BBF44731.1 2.34e-171 2 563 4 564
QHQ60083.1 1.69e-168 69 563 6 501
BCJ97263.1 5.24e-168 26 563 28 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JH8_A 5.48e-15 335 566 86 316
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3K_A 5.64e-14 331 561 190 424
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
4Q6T_A 4.60e-10 343 561 103 336
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 6.14e-17 279 564 52 343
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
O31682 5.39e-14 279 469 26 214
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.967173 0.030405 0.001851 0.000133 0.000089 0.000381

TMHMM  Annotations      download full data without filtering help

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