logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001854_00807

You are here: Home > Sequence: MGYG000001854_00807

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UBA11940;
CAZyme ID MGYG000001854_00807
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1253 MGYG000001854_9|CGC1 136035.75 4.0678
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001854 1440109 MAG Denmark Europe
Gene Location Start: 39147;  End: 42908  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 56 520 1.2e-98 0.9786666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 5.85e-04 148 285 2 114
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05342 Peptidase_M26_N 0.002 871 956 143 226
M26 IgA1-specific Metallo-endopeptidase N-terminal region. These peptidases, which cleave mammalian IgA, are found in Gram-positive bacteria. Often found associated with pfam00746, they may be attached to the cell wall.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAG59609.1 3.55e-75 61 529 410 825
ADL51369.1 1.68e-73 61 529 834 1249
ABX42257.1 1.58e-66 61 526 204 610
AWB44904.1 3.59e-66 21 516 15 432
AIQ18143.1 2.17e-65 61 368 2 283

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 5.90e-39 58 382 15 306
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 1.13e-13 57 374 2 325
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 2.65e-39 58 382 40 331
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 5.38e-38 58 382 40 331
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P22751 1.15e-19 58 368 389 639
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.014106 0.978357 0.005516 0.001386 0.000329 0.000259

TMHMM  Annotations      download full data without filtering help

start end
13 35