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CAZyme Information: MGYG000001874_00793

You are here: Home > Sequence: MGYG000001874_00793

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAMI01 sp900554095
Lineage Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; QAMI01; QAMI01 sp900554095
CAZyme ID MGYG000001874_00793
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
492 54942.41 8.7258
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001874 2081057 MAG Denmark Europe
Gene Location Start: 3258;  End: 4736  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001874_00793.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 90 271 1.5e-57 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.22e-04 36 235 29 246
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 0.010 417 438 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXP82553.1 8.07e-106 37 482 123 572
AKD03745.1 1.79e-102 37 460 52 464
AKD03746.1 1.07e-99 37 460 39 454
AHW58605.1 1.16e-99 15 468 16 480
AHW58599.1 2.88e-99 30 462 27 468

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.72e-49 28 463 13 416
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 4.20e-47 28 463 13 416
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 2.16e-43 37 463 22 416
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 5.87e-43 37 463 23 417
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88 1.56e-42 37 463 23 417
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999993 0.000032 0.000002 0.000000 0.000000 0.000008

TMHMM  Annotations      download full data without filtering help

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7 29