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CAZyme Information: MGYG000001887_01692

You are here: Home > Sequence: MGYG000001887_01692

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminiclostridium_E sp003512525
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminiclostridium_E; Ruminiclostridium_E sp003512525
CAZyme ID MGYG000001887_01692
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2550 290500.15 4.5952
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001887 2739679 MAG Denmark Europe
Gene Location Start: 31478;  End: 39130  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001887_01692.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 2.99e-73 1255 1782 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 1.31e-28 1923 2112 439 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00487 DEXDc 1.66e-10 1726 1829 7 110
DEAD-like helicases superfamily.
COG0553 HepA 5.59e-09 1375 2291 9 848
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair].
pfam04851 ResIII 1.02e-08 1725 1814 1 100
Type III restriction enzyme, res subunit.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 959 2488 1548 3159
QIW86704.1 0.0 959 2488 1616 3227
QIW86628.1 0.0 959 2488 1616 3227
AXF51455.1 2.80e-312 959 2529 1782 3436
AEY69616.1 4.05e-312 959 2468 1689 3283

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 2.37e-33 1046 2299 87 1567
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1
P52284 2.43e-07 1025 1143 6 115
Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001887_01692.