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CAZyme Information: MGYG000001903_00547

You are here: Home > Sequence: MGYG000001903_00547

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Firm-18; ;
CAZyme ID MGYG000001903_00547
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
691 79094.96 6.1461
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001903 2217690 MAG Denmark Europe
Gene Location Start: 3811;  End: 5886  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001903_00547.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 252 683 3e-48 0.8492063492063492

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 6.00e-16 355 534 7 185
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGY42778.1 9.61e-194 15 688 40 741
SCM59084.1 1.51e-184 9 688 43 751
BBD46135.1 1.71e-184 12 688 46 750
QUH27875.1 3.07e-184 13 688 6 706
AJY74261.1 1.19e-178 13 682 18 716

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000070 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001903_00547.