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CAZyme Information: MGYG000001910_00450

You are here: Home > Sequence: MGYG000001910_00450

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella dubosii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella dubosii
CAZyme ID MGYG000001910_00450
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 MGYG000001910_3|CGC1 49324.96 6.0301
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001910 3154435 MAG Denmark Europe
Gene Location Start: 144135;  End: 145430  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001910_00450.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 48 412 5e-116 0.9819277108433735

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 3.88e-86 30 412 1 340
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 3.38e-77 21 414 2 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD43358.1 0.0 1 431 7 437
QCD40373.1 9.43e-248 1 423 7 428
QCP71476.1 9.43e-248 1 423 7 428
QQR09854.1 1.38e-201 24 415 463 853
ARE60790.1 1.38e-201 24 415 463 853

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 8.49e-87 56 414 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 4.00e-54 23 414 9 367
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 1.68e-53 55 414 28 357
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3K11_A 1.28e-21 139 410 178 409
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
3QWT_A 7.78e-12 140 352 143 341
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 2.19e-53 23 414 9 367
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 1.43e-32 167 410 1 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 1.43e-32 167 410 1 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000897 0.998124 0.000217 0.000295 0.000243 0.000205

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001910_00450.