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CAZyme Information: MGYG000001910_01979

You are here: Home > Sequence: MGYG000001910_01979

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella dubosii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella dubosii
CAZyme ID MGYG000001910_01979
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
709 79147.85 4.3828
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001910 3154435 MAG Denmark Europe
Gene Location Start: 22563;  End: 24692  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 444 701 2e-48 0.6798679867986799

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 1.13e-35 448 701 100 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 2.99e-35 444 696 54 260
Glycosyl hydrolase family 10.
COG3693 XynA 5.12e-19 442 707 117 345
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 1.64e-11 55 151 2 98
Glycosyl hydrolase family 10.
COG3693 XynA 1.52e-07 80 175 51 144
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD43725.1 0.0 180 709 1 530
ALJ61518.1 2.23e-288 1 706 1 721
QVJ82141.1 2.19e-224 1 706 1 707
ADE81777.1 2.50e-223 1 706 1 707
AAB81559.1 5.01e-223 1 706 1 707

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1US3_A 3.06e-15 465 705 291 515
Nativexylanase10C from Cellvibrio japonicus [Cellvibrio japonicus]
1CLX_A 1.06e-14 464 706 116 347
CatalyticCore Of Xylanase A [Cellvibrio japonicus],1CLX_B Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_C Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_D Catalytic Core Of Xylanase A [Cellvibrio japonicus]
1W2P_A 1.07e-14 464 706 117 348
The3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W2P_B The 3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1US2_A 1.64e-14 465 705 291 515
Xylanase10C(mutant E385A) from Cellvibrio japonicus in complex with xylopentaose [Cellvibrio japonicus]
3MMD_A 2.50e-14 438 619 122 270
ChainA, Endo-1,4-beta-xylanase [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59675 2.01e-14 465 705 375 599
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
O94163 8.51e-14 446 703 126 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
P14768 1.87e-13 464 706 380 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2
Q96VB6 6.35e-13 448 703 126 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
P40943 1.23e-12 438 619 150 298
Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000048 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001910_01979.