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CAZyme Information: MGYG000001920_00950

You are here: Home > Sequence: MGYG000001920_00950

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900546355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900546355
CAZyme ID MGYG000001920_00950
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
727 MGYG000001920_23|CGC1 80631.46 4.0084
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001920 3068459 MAG Denmark Europe
Gene Location Start: 14063;  End: 16246  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 452 710 4e-44 0.6798679867986799

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.44e-29 453 706 54 260
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 4.68e-29 453 711 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 3.96e-21 460 716 126 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 8.86e-14 60 136 9 85
Glycosyl hydrolase family 10.
COG3693 XynA 2.68e-07 58 137 30 109
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRQ48288.1 1.66e-277 17 716 18 719
QUT46089.1 1.55e-275 17 716 18 719
AXH21505.1 7.90e-221 1 716 1 746
EDV05072.1 7.90e-221 1 716 1 746
QIU93949.1 1.60e-219 1 713 1 725

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1W32_A 4.87e-13 474 716 118 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W32_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
4QPW_A 5.04e-13 187 287 37 141
BiXyn10ACBM1 with Xylohexaose Bound [Bacteroides intestinalis DSM 17393]
1W3H_A 5.32e-13 474 716 129 359
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W3H_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
4MGS_A 6.10e-13 187 287 43 147
BiXyn10ACBM1 APO [Bacteroides intestinalis DSM 17393]
1CLX_A 1.54e-12 474 716 117 347
CatalyticCore Of Xylanase A [Cellvibrio japonicus],1CLX_B Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_C Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_D Catalytic Core Of Xylanase A [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O94163 9.48e-12 454 713 125 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
P14768 2.18e-11 474 716 381 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2
P33559 2.27e-11 454 713 127 327
Endo-1,4-beta-xylanase A OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xynA PE=1 SV=2
C5J411 7.26e-11 454 713 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger OX=5061 GN=xlnC PE=2 SV=2
O69230 8.98e-11 437 725 459 714
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000006 0.002819 0.997206 0.000001 0.000002 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001920_00950.