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CAZyme Information: MGYG000001983_01302

You are here: Home > Sequence: MGYG000001983_01302

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysosmobacter sp000436875
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Dysosmobacter; Dysosmobacter sp000436875
CAZyme ID MGYG000001983_01302
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
498 53064.05 4.8646
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001983 2532664 MAG Spain Europe
Gene Location Start: 39590;  End: 41086  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001983_01302.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 240 480 2.4e-16 0.7331081081081081

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 2.27e-18 245 480 35 290
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
NF033190 inl_like_NEAT_1 2.06e-11 32 200 582 748
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
COG3858 YaaH 3.75e-10 282 480 186 395
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 3.20e-07 282 495 83 293
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00395 SLH 1.51e-06 158 196 1 42
S-layer homology domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCI59678.1 9.26e-197 1 495 1 496
BCK84377.1 2.56e-158 1 491 2 492
QNL44109.1 5.98e-130 6 495 3 491
QGG48974.1 1.99e-60 32 496 35 558
QIB69198.1 6.27e-59 32 496 34 542

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4AQ1_A 1.91e-09 32 202 4 166
Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus]
4AQ1_C 1.91e-09 32 202 4 166
Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38535 2.68e-12 32 206 908 1083
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38536 5.33e-12 32 206 1682 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P49052 1.73e-11 2 259 4 262
S-layer protein OS=Bacillus licheniformis OX=1402 PE=3 SV=1
Q9ZES5 1.18e-10 2 202 4 203
S-layer protein OS=Bacillus thuringiensis subsp. finitimus OX=29337 GN=ctc PE=1 SV=1
P94217 2.11e-10 2 259 4 262
S-layer protein EA1 OS=Bacillus anthracis OX=1392 GN=eag PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000572 0.824809 0.173801 0.000277 0.000278 0.000248

TMHMM  Annotations      download full data without filtering help

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