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CAZyme Information: MGYG000001998_01150
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp900552795 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900552795 | |||||||||||
| CAZyme ID | MGYG000001998_01150 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 116494; End: 123480 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 1363 | 1643 | 6.6e-68 | 0.9479166666666666 |
| PL1 | 1767 | 2025 | 2.3e-38 | 0.9158415841584159 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 5.57e-38 | 1368 | 1636 | 94 | 389 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02773 | PLN02773 | 4.51e-34 | 1363 | 1626 | 12 | 270 | pectinesterase |
| PLN02432 | PLN02432 | 1.19e-28 | 1363 | 1625 | 18 | 259 | putative pectinesterase |
| PLN02682 | PLN02682 | 1.65e-28 | 1362 | 1625 | 73 | 334 | pectinesterase family protein |
| COG3866 | PelB | 1.28e-26 | 1797 | 2112 | 102 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADD62022.1 | 0.0 | 47 | 2125 | 1 | 2030 |
| QEH70392.1 | 0.0 | 564 | 2140 | 177 | 1768 |
| ACZ98653.1 | 6.05e-318 | 879 | 2129 | 97 | 1353 |
| ACR72234.1 | 1.81e-115 | 878 | 1647 | 278 | 1063 |
| CDM70269.1 | 2.20e-84 | 1692 | 2124 | 112 | 552 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5GT5_A | 6.08e-78 | 1697 | 2124 | 7 | 446 | Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602] |
| 3UW0_A | 9.47e-26 | 1368 | 1636 | 44 | 345 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 1.27e-24 | 1345 | 1640 | 2 | 325 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 4.35e-20 | 1345 | 1640 | 2 | 325 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 4.35e-20 | 1345 | 1640 | 2 | 325 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D3JTC2 | 7.72e-73 | 1697 | 2032 | 36 | 374 | Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1 |
| Q9ZQA3 | 1.48e-23 | 1362 | 1625 | 95 | 352 | Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1 |
| O23038 | 2.93e-23 | 1363 | 1628 | 96 | 358 | Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2 |
| B2VPR8 | 9.50e-21 | 1363 | 1625 | 72 | 322 | Pectinesterase 2 OS=Olea europaea OX=4146 PE=1 SV=1 |
| Q9LVQ0 | 1.95e-20 | 1363 | 1625 | 12 | 269 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.988772 | 0.010356 | 0.000583 | 0.000032 | 0.000021 | 0.000209 |
