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CAZyme Information: MGYG000002049_00062

You are here: Home > Sequence: MGYG000002049_00062

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900556595
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900556595
CAZyme ID MGYG000002049_00062
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
592 MGYG000002049_2|CGC1 66193.97 8.5216
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002049 1913681 MAG China Asia
Gene Location Start: 20007;  End: 21785  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002049_00062.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 14 479 1.2e-69 0.8074074074074075

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 6.65e-26 42 429 35 421
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam02366 PMT 9.69e-06 57 236 46 238
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
pfam13231 PMT_2 9.25e-05 71 231 2 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG4745 COG4745 0.007 45 162 42 154
Predicted membrane-bound mannosyltransferase [General function prediction only].
pfam10131 PTPS_related 0.008 70 294 3 227
6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein. This domain is found in various bacterial hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. The exact function of the domain has not, as yet, been established.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAJ74247.1 2.86e-26 33 345 28 329
QII13172.1 5.86e-24 42 360 5 313
CAJ73030.1 7.24e-24 42 360 36 344
BBB92576.1 3.67e-23 21 365 12 338
AIG02376.1 2.13e-22 18 364 13 340

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 1.62e-13 32 397 49 406
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O67270 1.53e-16 20 348 6 314
Uncharacterized protein aq_1220 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1220 PE=3 SV=1
O67601 9.06e-11 36 257 24 230
Uncharacterized protein aq_1704 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1704 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.639278 0.345356 0.006453 0.001840 0.001037 0.006044

TMHMM  Annotations      download full data without filtering help

start end
15 37
74 93
113 135
147 164
184 206
213 235
270 292
313 332
336 358
365 387
416 438
447 469