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CAZyme Information: MGYG000002060_00237
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-110 sp003525905 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-110; CAG-110 sp003525905 | |||||||||||
| CAZyme ID | MGYG000002060_00237 | |||||||||||
| CAZy Family | GH121 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 62157; End: 68663 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH121 | 13 | 1440 | 0 | 0.9885057471264368 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033190 | inl_like_NEAT_1 | 7.30e-11 | 1987 | 2095 | 641 | 749 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam07532 | Big_4 | 2.42e-09 | 1370 | 1430 | 1 | 59 | Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins. |
| NF033190 | inl_like_NEAT_1 | 2.86e-09 | 1989 | 2165 | 582 | 753 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 4.43e-09 | 2049 | 2089 | 1 | 41 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 1.97e-08 | 1949 | 2162 | 469 | 689 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBF43066.1 | 0.0 | 39 | 1493 | 39 | 1492 |
| QOC94837.1 | 2.34e-299 | 37 | 1447 | 1 | 1428 |
| QKW17217.1 | 4.60e-299 | 37 | 1447 | 1 | 1428 |
| AEB44831.1 | 3.93e-296 | 37 | 1447 | 1 | 1428 |
| AVT34679.1 | 2.18e-295 | 37 | 1448 | 1 | 1430 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6M5A_A | 1.53e-138 | 31 | 855 | 2 | 862 | Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum] |
| 5MQS_A | 4.09e-11 | 279 | 812 | 593 | 1108 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 5MQR_A | 3.56e-10 | 320 | 812 | 648 | 1108 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E8MGH9 | 2.30e-217 | 5 | 1445 | 7 | 1468 | Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1 |
| P38537 | 7.01e-18 | 1995 | 2168 | 40 | 208 | Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1 |
| C6CRV0 | 1.13e-14 | 1987 | 2162 | 1281 | 1457 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P19424 | 5.42e-11 | 1989 | 2164 | 41 | 214 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
| P22258 | 1.88e-10 | 1978 | 2164 | 20 | 190 | Cell surface protein OS=Thermoanaerobacter kivui OX=2325 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000245 | 0.999016 | 0.000182 | 0.000194 | 0.000169 | 0.000148 |
