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CAZyme Information: MGYG000002108_01178

You are here: Home > Sequence: MGYG000002108_01178

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900290275
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900290275
CAZyme ID MGYG000002108_01178
CAZy Family PL29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
601 MGYG000002108_31|CGC1 66905.56 6.7443
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002108 2842572 MAG Mongolia Asia
Gene Location Start: 14679;  End: 16484  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002108_01178.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL29 70 384 4.6e-102 0.9966777408637874

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16315 DUF4955 2.46e-78 404 554 1 148
Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708 Pectate_lyase_3 6.34e-05 72 116 3 45
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEH14500.1 7.38e-221 8 554 9 548
QNL40303.1 1.38e-183 15 552 312 829
QDM10828.1 1.95e-183 15 552 312 829
QUT78855.1 1.95e-183 15 552 312 829
AGB28564.1 2.10e-173 2 601 5 597

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000329 0.998925 0.000190 0.000199 0.000177 0.000157

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002108_01178.