logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002126_00845

You are here: Home > Sequence: MGYG000002126_00845

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1390 sp900764045
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; UBA1390; UBA1390; UBA1390 sp900764045
CAZyme ID MGYG000002126_00845
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1025 117062.44 5.2323
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002126 2317686 MAG Mongolia Asia
Gene Location Start: 52502;  End: 55579  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002126_00845.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 5 707 7.4e-57 0.7803398058252428

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03143 A4_beta-galactosidase_middle_domain 5.74e-06 457 557 2 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam17132 Glyco_hydro_106 1.31e-05 174 577 391 780
alpha-L-rhamnosidase.
pfam08532 Glyco_hydro_42M 0.002 455 557 2 89
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.
pfam05800 GvpO 0.004 136 163 65 92
Gas vesicle synthesis protein GvpO. This family consists of archaeal GvpO proteins which are required for gas vesicle synthesis. The family also contains two related sequences from Streptomyces coelicolor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEP78513.1 0.0 1 1025 10 1034
AEF82861.1 3.42e-317 6 1025 15 1036
AUS98191.1 7.14e-316 1 1023 11 1032
AJG98234.1 2.25e-307 1 1024 11 1032
QNO17272.1 2.26e-288 1 1022 8 1029

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002126_00845.