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CAZyme Information: MGYG000002133_02256

You are here: Home > Sequence: MGYG000002133_02256

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000436915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000436915
CAZyme ID MGYG000002133_02256
CAZy Family GH28
CAZyme Description Endo-polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
436 MGYG000002133_129|CGC1 48280.76 6.7365
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002133 2840923 MAG United States North America
Gene Location Start: 1656;  End: 2966  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002133_02256.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 48 398 2e-66 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.28e-52 24 310 83 396
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 4.50e-20 7 309 28 307
polygalacturonase
PLN02793 PLN02793 2.15e-19 25 310 54 328
Probable polygalacturonase
PLN02218 PLN02218 4.26e-18 26 310 70 343
polygalacturonase ADPG
PLN03003 PLN03003 5.75e-18 1 392 1 357
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADE82966.1 9.44e-203 24 428 25 428
QVJ79670.1 1.03e-199 24 428 25 428
AGB27557.1 4.19e-199 22 435 23 436
BCS85558.1 9.84e-199 27 429 1 403
QDO68557.1 3.92e-180 24 416 29 421

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 2.56e-31 22 267 43 312
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
4MXN_A 1.62e-21 22 254 20 236
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
3JUR_A 2.42e-16 22 238 26 270
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 1.44e-13 26 231 159 405
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 1.83e-09 41 234 27 229
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.39e-19 26 267 65 314
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 1.34e-16 26 235 26 217
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P48978 1.39e-15 21 233 96 297
Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1
Q94AJ5 2.33e-15 26 233 55 254
Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1
Q8RY29 5.31e-15 26 235 70 271
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000258 0.999102 0.000187 0.000157 0.000153 0.000153

TMHMM  Annotations      download full data without filtering help

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5 27