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CAZyme Information: MGYG000002159_02275

You are here: Home > Sequence: MGYG000002159_02275

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS403 sp900540865
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS403; UMGS403 sp900540865
CAZyme ID MGYG000002159_02275
CAZy Family CBM26
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1015 113272.41 4.5788
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002159 2536943 MAG Germany Europe
Gene Location Start: 1112;  End: 4159  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002159_02275.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH36 667 927 1.9e-20 0.37790697674418605
CBM26 35 105 1.1e-17 0.9466666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16738 CBM26 1.21e-16 36 99 1 64
Starch-binding module 26. CBM26 is a carbohydrate-binding module that binds starch.
cd14256 Dockerin_I 1.24e-14 953 1009 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404 Dockerin_1 1.82e-10 954 999 1 47
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
cd14253 Dockerin 7.44e-08 954 1004 1 51
Dockerin repeat domain. Dockerins are modules in the cellulosome complex that often anchor catalytic subunits by binding to cohesin domains of scaffolding proteins. Three types of dockerins and their corresponding cohesin have been described in the literature. This alignment models two consecutive dockerin repeats, the functional unit.
cd14252 Dockerin_like 3.68e-07 954 1005 1 53
Dockerin repeat domains and domains resembling dockerin repeats. Dockerins are modules in the cellulosome complex that often anchor catalytic subunits by binding to cohesin domains of scaffolding proteins. Three types of dockerins and their corresponding cohesin have been described in the literature. This alignment models two consecutive dockerin repeats, the functional unit.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ94273.1 4.01e-105 134 943 197 1029
BBO33698.1 4.49e-10 473 904 186 649
AWW14941.1 1.41e-09 486 944 264 747
QJE95713.1 5.44e-09 493 943 240 720
ABP66728.1 2.15e-08 476 944 230 726

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6JHP_A 5.21e-11 486 944 274 757
Crystalstructure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila [Paecilomyces sp. 'thermophila'],6JHP_B Crystal structure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila [Paecilomyces sp. 'thermophila'],6JHP_C Crystal structure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila [Paecilomyces sp. 'thermophila'],6JHP_D Crystal structure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila [Paecilomyces sp. 'thermophila']

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000314 0.999010 0.000160 0.000197 0.000157 0.000146

TMHMM  Annotations      download full data without filtering help

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