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CAZyme Information: MGYG000002203_00836
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; | |||||||||||
| CAZyme ID | MGYG000002203_00836 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 57109; End: 59418 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 465 | 761 | 1e-35 | 0.7846153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 3.48e-17 | 443 | 760 | 18 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 2.77e-15 | 435 | 683 | 152 | 398 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 3.43e-08 | 509 | 577 | 164 | 234 | polygalacturonase |
| PLN03003 | PLN03003 | 2.58e-06 | 509 | 711 | 145 | 326 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 2.68e-06 | 510 | 693 | 185 | 337 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBL02017.1 | 8.84e-235 | 16 | 756 | 15 | 734 |
| QRP58902.1 | 1.49e-195 | 14 | 747 | 26 | 756 |
| QQA09745.1 | 1.49e-195 | 14 | 747 | 26 | 756 |
| QQT79214.1 | 1.49e-195 | 14 | 747 | 26 | 756 |
| ASW16403.1 | 1.49e-195 | 14 | 747 | 26 | 756 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 2.00e-10 | 510 | 683 | 198 | 351 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A2QW66 | 2.63e-06 | 410 | 682 | 81 | 339 | Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1 |
| Q27UB2 | 2.63e-06 | 410 | 682 | 81 | 339 | Exopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgxA PE=3 SV=1 |
| Q9LW07 | 4.79e-06 | 510 | 711 | 146 | 326 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000012 | 0.010807 | 0.989236 | 0.000003 | 0.000005 | 0.000004 |