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CAZyme Information: MGYG000002216_01241
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; ; | |||||||||||
| CAZyme ID | MGYG000002216_01241 | |||||||||||
| CAZy Family | GH59 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 23793; End: 29114 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH59 | 303 | 986 | 1.4e-161 | 0.993660855784469 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02057 | Glyco_hydro_59 | 3.56e-91 | 309 | 646 | 1 | 292 | Glycosyl hydrolase family 59. |
| pfam06439 | DUF1080 | 8.24e-09 | 834 | 986 | 22 | 182 | Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase. |
| COG5520 | XynC | 2.00e-06 | 394 | 554 | 110 | 270 | O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| COG3883 | CwlO1 | 5.39e-05 | 1474 | 1586 | 147 | 257 | Uncharacterized N-terminal domain of peptidoglycan hydrolase CwlO [Function unknown]. |
| pfam07554 | FIVAR | 1.05e-04 | 1510 | 1570 | 1 | 68 | FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUL53185.1 | 6.13e-293 | 1 | 1459 | 1 | 1544 |
| QNK59157.1 | 1.56e-283 | 1 | 1512 | 1 | 1616 |
| QLH25411.1 | 6.49e-275 | 271 | 1156 | 18 | 953 |
| AMW11854.1 | 7.32e-274 | 271 | 1156 | 18 | 953 |
| QUW95523.1 | 8.44e-272 | 271 | 1156 | 21 | 954 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B5X3C1 | 6.14e-26 | 306 | 986 | 34 | 663 | Galactocerebrosidase OS=Salmo salar OX=8030 GN=galc PE=2 SV=1 |
| P54803 | 1.75e-23 | 306 | 986 | 52 | 682 | Galactocerebrosidase OS=Homo sapiens OX=9606 GN=GALC PE=1 SV=3 |
| O02791 | 1.95e-21 | 306 | 986 | 52 | 682 | Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2 |
| Q0VA39 | 3.03e-20 | 306 | 989 | 44 | 676 | Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1 |
| Q498K0 | 2.09e-19 | 306 | 989 | 44 | 675 | Galactocerebrosidase OS=Xenopus laevis OX=8355 GN=galc PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000383 | 0.998812 | 0.000209 | 0.000229 | 0.000175 | 0.000147 |
