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CAZyme Information: MGYG000002218_02408
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parabacteroides sp000436495 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp000436495 | |||||||||||
| CAZyme ID | MGYG000002218_02408 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 45322; End: 47955 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 70 | 317 | 6.9e-69 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 1.68e-136 | 17 | 874 | 4 | 764 | beta-glucosidase BglX. |
| PLN03080 | PLN03080 | 5.63e-130 | 35 | 845 | 40 | 754 | Probable beta-xylosidase; Provisional |
| COG1472 | BglX | 2.19e-74 | 59 | 442 | 41 | 387 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam01915 | Glyco_hydro_3_C | 3.72e-58 | 388 | 758 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 7.66e-43 | 70 | 348 | 58 | 316 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIX66981.1 | 0.0 | 10 | 877 | 1 | 868 |
| ABR42969.1 | 0.0 | 10 | 877 | 1 | 868 |
| QRO16846.1 | 0.0 | 10 | 877 | 1 | 868 |
| QUT19023.1 | 0.0 | 10 | 877 | 1 | 868 |
| QUT95269.1 | 0.0 | 10 | 877 | 1 | 868 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7VC7_A | 3.22e-93 | 47 | 858 | 25 | 715 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC6_A | 3.22e-93 | 47 | 858 | 25 | 715 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 5Z87_A | 5.30e-86 | 61 | 874 | 108 | 784 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 5XXL_A | 2.01e-81 | 59 | 877 | 67 | 754 | Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482] |
| 6R5I_A | 3.11e-81 | 73 | 874 | 69 | 732 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 9.63e-287 | 13 | 876 | 2 | 861 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| Q9SGZ5 | 4.93e-113 | 35 | 863 | 36 | 759 | Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2 |
| T2KMH0 | 1.12e-106 | 39 | 877 | 28 | 723 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| Q94KD8 | 6.99e-104 | 42 | 876 | 49 | 765 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
| A5JTQ2 | 1.15e-102 | 24 | 861 | 37 | 764 | Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000014 | 0.000343 | 0.999687 | 0.000003 | 0.000001 | 0.000001 |