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CAZyme Information: MGYG000002219_00039

You are here: Home > Sequence: MGYG000002219_00039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1731;
CAZyme ID MGYG000002219_00039
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
671 74468.05 8.1789
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002219 2429287 MAG Peru South America
Gene Location Start: 5643;  End: 7658  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002219_00039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 97 493 3.4e-90 0.6003062787136294

CDD Domains      help

MGYG000002219_00039 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXP07844.1 2.71e-213 58 664 23 686
ADE53394.1 1.94e-140 79 664 51 691
ASV75458.1 3.75e-134 171 660 132 678
BAM05087.1 1.50e-133 84 660 90 727
AXP07838.1 7.87e-131 62 660 53 706

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6XJ9_A 1.16e-86 159 665 160 764
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
4BQ2_A 3.33e-84 236 663 204 746
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 8.99e-84 236 663 204 746
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A 4.60e-81 236 664 223 763
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
5T3B_A 8.20e-12 276 660 80 473
ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 1.78e-85 228 665 424 954
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 4.60e-58 73 660 230 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.026924 0.884193 0.084632 0.002918 0.000739 0.000539

TMHMM  Annotations      download full data without filtering help

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