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CAZyme Information: MGYG000002219_00293
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1731; | |||||||||||
| CAZyme ID | MGYG000002219_00293 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4739; End: 5902 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 6 | 364 | 3.7e-87 | 0.9858757062146892 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 1.49e-93 | 3 | 346 | 2 | 340 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 1.36e-85 | 3 | 384 | 2 | 380 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 1.74e-67 | 5 | 330 | 1 | 324 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 1.30e-56 | 5 | 341 | 8 | 341 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK14089 | PRK14089 | 2.29e-45 | 44 | 336 | 47 | 308 | lipid-A-disaccharide synthase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QBG48029.1 | 2.91e-60 | 1 | 347 | 1 | 341 |
| QHI67954.1 | 5.82e-56 | 1 | 371 | 1 | 363 |
| QDA58158.1 | 1.00e-55 | 3 | 385 | 6 | 380 |
| QQL43997.1 | 1.27e-55 | 4 | 381 | 6 | 377 |
| CAI09552.1 | 2.41e-55 | 1 | 368 | 1 | 365 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 8.14e-35 | 22 | 331 | 43 | 331 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 8.14e-35 | 22 | 331 | 43 | 331 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5NZG2 | 4.83e-56 | 1 | 368 | 1 | 365 | Lipid-A-disaccharide synthase OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=lpxB PE=3 SV=1 |
| Q21HI5 | 5.87e-52 | 3 | 383 | 5 | 380 | Lipid-A-disaccharide synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=lpxB PE=3 SV=1 |
| Q3SKM8 | 2.30e-50 | 7 | 376 | 1 | 362 | Lipid-A-disaccharide synthase OS=Thiobacillus denitrificans (strain ATCC 25259) OX=292415 GN=lpxB PE=3 SV=1 |
| C1F718 | 6.23e-50 | 5 | 351 | 7 | 357 | Lipid-A-disaccharide synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / BCRC 80197 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) OX=240015 GN=lpxB PE=3 SV=1 |
| Q21WX7 | 1.33e-49 | 2 | 383 | 8 | 387 | Lipid-A-disaccharide synthase OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000054 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |