You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002267_03884
You are here: Home > Sequence: MGYG000002267_03884
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Eisenbergiella sp003478085 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eisenbergiella; Eisenbergiella sp003478085 | |||||||||||
| CAZyme ID | MGYG000002267_03884 | |||||||||||
| CAZy Family | GH39 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 18540; End: 20510 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH39 | 261 | 578 | 5.1e-37 | 0.7424593967517401 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG0794 | GutQ | 7.72e-43 | 2 | 189 | 12 | 200 | D-arabinose 5-phosphate isomerase GutQ [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]. |
| cd05014 | SIS_Kpsf | 1.07e-35 | 30 | 156 | 2 | 128 | KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway. |
| cd05013 | SIS_RpiR | 2.92e-22 | 16 | 153 | 1 | 136 | RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate. |
| PRK10892 | PRK10892 | 1.75e-21 | 34 | 181 | 56 | 200 | arabinose-5-phosphate isomerase KdsD. |
| PRK11543 | gutQ | 7.23e-21 | 34 | 181 | 51 | 195 | arabinose-5-phosphate isomerase GutQ. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVM69820.1 | 4.95e-222 | 192 | 642 | 4 | 448 |
| QJD82796.1 | 2.99e-68 | 197 | 595 | 9 | 398 |
| QTH43246.1 | 7.93e-68 | 200 | 580 | 12 | 382 |
| QJD85864.1 | 2.53e-67 | 189 | 589 | 2 | 398 |
| QEL16017.1 | 9.97e-59 | 189 | 575 | 25 | 405 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3FXA_A | 2.41e-39 | 2 | 184 | 18 | 201 | Crystalstructure of a putative sugar-phosphate isomerase (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 A resolution [Listeria monocytogenes serotype 4b str. F2365],3FXA_B Crystal structure of a putative sugar-phosphate isomerase (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 A resolution [Listeria monocytogenes serotype 4b str. F2365],3FXA_C Crystal structure of a putative sugar-phosphate isomerase (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 A resolution [Listeria monocytogenes serotype 4b str. F2365],3FXA_D Crystal structure of a putative sugar-phosphate isomerase (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 A resolution [Listeria monocytogenes serotype 4b str. F2365] |
| 5Z3K_A | 7.58e-26 | 189 | 582 | 7 | 380 | Crystalstructure of glucosidase from Croceicoccus marinus at 1.8 Angstrom resolution [Croceicoccus marinus],5Z3K_B Crystal structure of glucosidase from Croceicoccus marinus at 1.8 Angstrom resolution [Croceicoccus marinus] |
| 3ETN_A | 4.15e-19 | 30 | 183 | 61 | 216 | Crystalstructure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution [Bacteroides fragilis NCTC 9343],3ETN_B Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution [Bacteroides fragilis NCTC 9343],3ETN_C Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution [Bacteroides fragilis NCTC 9343],3ETN_D Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution [Bacteroides fragilis NCTC 9343] |
| 5UQI_A | 7.33e-16 | 35 | 178 | 50 | 193 | E.coli CFT073 c3406 in complex with A5P [Escherichia coli CFT073],5VHU_A E. coli CFT073 c3406 [Escherichia coli] |
| 2XHZ_A | 8.27e-13 | 34 | 162 | 58 | 183 | Probingthe active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography [Escherichia coli],2XHZ_B Probing the active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography [Escherichia coli],2XHZ_C Probing the active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography [Escherichia coli],2XHZ_D Probing the active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9HVW0 | 1.63e-25 | 24 | 246 | 42 | 248 | Arabinose 5-phosphate isomerase KdsD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=kdsD PE=1 SV=1 |
| O67500 | 7.73e-24 | 16 | 182 | 30 | 197 | Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1546 PE=3 SV=1 |
| P42502 | 8.80e-22 | 2 | 181 | 29 | 209 | Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli OX=562 GN=kpsF PE=3 SV=1 |
| Q8FDQ2 | 2.55e-21 | 2 | 181 | 29 | 209 | Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=kpsF PE=1 SV=2 |
| Q47334 | 2.55e-21 | 2 | 181 | 29 | 209 | Arabinose 5-phosphate isomerase KpsF OS=Escherichia coli OX=562 GN=kpsF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000060 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |