logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002280_00571

You are here: Home > Sequence: MGYG000002280_00571

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA9502 sp003481825
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA9502; UBA9502 sp003481825
CAZyme ID MGYG000002280_00571
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
389 44804.43 4.4312
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002280 3426867 Isolate China Asia
Gene Location Start: 7876;  End: 9045  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002280_00571.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 121 361 4e-25 0.9580152671755725

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00150 Cellulase 2.62e-08 117 346 20 257
Cellulase (glycosyl hydrolase family 5).
COG5263 COG5263 1.01e-07 26 83 257 313
Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism].
NF033838 PspC_subgroup_1 1.74e-05 21 113 543 630
pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
NF033838 PspC_subgroup_1 2.16e-05 23 83 625 683
pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
NF033840 PspC_relate_1 2.84e-05 21 99 527 601
PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIB28168.1 5.54e-144 91 388 2 299
QCI58964.2 3.55e-138 91 382 28 319
QMW91197.1 1.03e-129 93 382 28 317
BBK76626.1 1.03e-129 93 382 28 317
QUF84801.1 1.46e-129 93 382 28 317

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3HZ3_A 2.90e-06 26 83 903 960
Lactobacillusreuteri N-terminally truncated glucansucrase GTF180(D1025N)-sucrose complex [Limosilactobacillus reuteri]
3KLK_A 2.90e-06 26 83 903 960
Crystalstructure of Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in triclinic apo- form [Limosilactobacillus reuteri],4AYG_A Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in orthorhombic apo-form [Limosilactobacillus reuteri],4AYG_B Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in orthorhombic apo-form [Limosilactobacillus reuteri]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000295 0.998884 0.000267 0.000193 0.000187 0.000167

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002280_00571.