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CAZyme Information: MGYG000002292_01589

You are here: Home > Sequence: MGYG000002292_01589

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species TF01-11 sp003529475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; TF01-11; TF01-11 sp003529475
CAZyme ID MGYG000002292_01589
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
570 63907.03 8.6188
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002292 3137432 Isolate China Asia
Gene Location Start: 82015;  End: 83727  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002292_01589.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 221 555 1.7e-40 0.9256756756756757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.47e-68 275 564 19 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 1.42e-40 283 565 128 419
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 1.11e-37 284 561 26 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 1.85e-28 330 554 78 305
Glycosyl hydrolases family 18.
smart00636 Glyco_18 2.04e-26 333 555 84 333
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCN32821.1 5.95e-181 2 568 3 565
BCJ96722.1 2.10e-176 2 568 3 567
BCJ97263.1 5.97e-176 1 568 1 567
BBF44731.1 7.28e-174 2 569 4 566
ABX44096.1 5.08e-161 2 568 3 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JH8_A 1.36e-18 337 561 85 307
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3K_A 7.87e-16 334 569 190 428
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
5XWQ_A 5.17e-09 290 557 29 356
Crystalstructure of chitinase (RmChi1) from Rhizomucor miehei (sp p32 2 1, MR) [Rhizomucor miehei],5YUQ_A Chain A, Chintase [Rhizomucor miehei],5YUQ_B Chain B, Chintase [Rhizomucor miehei],7FBT_A Chain A, Chitinase [Rhizomucor miehei]
1GOI_A 7.07e-09 290 557 62 409
Crystalstructure of the D140N mutant of chitinase B from Serratia marcescens at 1.45 A resolution [Serratia marcescens],1GOI_B Crystal structure of the D140N mutant of chitinase B from Serratia marcescens at 1.45 A resolution [Serratia marcescens]
6JK9_A 2.84e-08 290 557 60 407
Crystalstructure of Serratia marcescens Chitinase B complexed with compound 2-8-14 [Serratia marcescens],6JK9_B Crystal structure of Serratia marcescens Chitinase B complexed with compound 2-8-14 [Serratia marcescens],7C34_A Crystal structure of Serratia marcescens Chitinase B complexed with Berberine [Serratia marcescens],7C34_B Crystal structure of Serratia marcescens Chitinase B complexed with Berberine [Serratia marcescens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37531 1.69e-19 330 564 181 419
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O31682 4.82e-15 279 473 22 214
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
P11797 3.60e-07 290 557 62 409
Chitinase B OS=Serratia marcescens OX=615 GN=chiB PE=1 SV=1
C0H404 3.76e-06 519 568 35 83
Probably inactive glycosylase YkzR OS=Bacillus subtilis (strain 168) OX=224308 GN=ykzR PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.950644 0.046112 0.001372 0.000329 0.000174 0.001407

TMHMM  Annotations      download full data without filtering help

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