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CAZyme Information: MGYG000002293_00390

You are here: Home > Sequence: MGYG000002293_00390

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900557255
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557255
CAZyme ID MGYG000002293_00390
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 26532.05 10.4544
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002293 3611909 Isolate China Asia
Gene Location Start: 219299;  End: 220033  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002293_00390.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 73 220 2.6e-56 0.8087431693989071

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 7.07e-09 22 221 28 239
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 4.72e-146 19 223 1 205
AGB28243.1 5.54e-112 1 227 1 228
VEH16322.1 1.30e-103 17 222 22 228
QCD40778.1 1.28e-95 20 223 17 226
QCP73827.1 1.28e-95 20 223 17 226

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0XMA2 9.16e-31 13 177 8 177
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 9.16e-31 13 177 8 177
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 2.45e-30 13 177 8 177
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q0CLG7 2.39e-29 24 217 22 210
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7 6.36e-29 24 177 22 176
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000510 0.998482 0.000223 0.000272 0.000261 0.000216

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002293_00390.