dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002293_02793

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Basic Information help

Species

Prevotella sp900557255

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557255

CAZyme ID

MGYG000002293_02793

CAZy Family

GH30

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
524	MGYG000002293_57\|CGC1	59243.74	7.8816

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002293	3611909	Isolate	China	Asia

Gene Location

Start: 12509; End: 14083 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.38

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH30	31	521	4.2e-178	0.9917355371900827

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14587	Glyco_hydr_30_2	7.43e-129	40	392	13	366	O-Glycosyl hydrolase family 30.
COG5520	XynC	1.69e-17	32	522	37	427	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189	Glyco_hydro_30C	0.001	424	521	1	63	Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNT66373.1	0.0	1	524	1	524
QVJ80557.1	4.62e-261	6	522	1	504
EFI72737.1	6.58e-254	11	522	3	514
BCS84535.1	1.37e-253	7	524	3	517
VEH15028.1	1.88e-249	3	522	4	517

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CLW_A	2.23e-88	31	494	8	468	Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
4CKQ_A	2.37e-16	105	522	48	409	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4UQA_A	1.34e-15	105	522	48	409	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5A6L_A	1.34e-15	105	522	48	409	ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],5A6M_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus ATCC 27405]
6M5Z_A	1.58e-12	32	522	26	452	ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
G2Q1N4	8.40e-10	8	489	2	430	GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.003915	0.992491	0.002870	0.000265	0.000216	0.000207

TMHMM Annotations help

There is no transmembrane helices in MGYG000002293_02793.