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CAZyme Information: MGYG000002296_00543
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptococcus koreensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus koreensis | |||||||||||
| CAZyme ID | MGYG000002296_00543 | |||||||||||
| CAZy Family | GT0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 567276; End: 569036 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3754 | RgpF | 0.0 | 1 | 583 | 1 | 593 | Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis]. |
| pfam05045 | RgpF | 0.0 | 34 | 516 | 1 | 501 | Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SQF25488.1 | 9.09e-248 | 1 | 580 | 1 | 577 |
| QBS00304.1 | 1.83e-247 | 1 | 580 | 1 | 577 |
| QBS00073.1 | 1.83e-247 | 1 | 580 | 1 | 577 |
| QBS00405.1 | 1.83e-247 | 1 | 580 | 1 | 577 |
| QHD71849.1 | 1.83e-247 | 1 | 580 | 1 | 577 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| F7YJG6 | 6.31e-07 | 57 | 216 | 81 | 231 | Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2 |
| P0DJH1 | 6.31e-07 | 57 | 216 | 81 | 231 | Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000077 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |