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CAZyme Information: MGYG000002301_01359

You are here: Home > Sequence: MGYG000002301_01359

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus warneri
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus warneri
CAZyme ID MGYG000002301_01359
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
258 MGYG000002301_2|CGC2 29864.14 9.799
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002301 2673052 Isolate China Asia
Gene Location Start: 110886;  End: 111662  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002301_01359.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 114 241 1.4e-25 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.01e-88 20 257 7 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 5.44e-33 102 244 1 142
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 1.06e-08 114 243 1 91
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 4.91e-04 105 241 34 182
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VED31146.1 9.06e-185 1 258 1 258
QDW95872.1 9.06e-185 1 258 1 258
AXZ22759.1 9.06e-185 1 258 1 258
AGC89926.1 9.06e-185 1 258 1 258
VED71953.1 9.06e-185 1 258 1 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 1.04e-113 35 257 5 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 8.52e-113 35 257 5 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 9.69e-50 61 246 35 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 1.23e-44 39 243 50 261
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 2.21e-44 39 243 20 231
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O33635 1.96e-50 66 246 1131 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 1.96e-50 66 246 1131 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q8CPQ1 1.96e-50 66 246 1131 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q8NX96 4.36e-45 61 246 1047 1244
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GAG0 4.36e-45 61 246 1041 1238
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.990072 0.002051 0.000686 0.000015 0.000008 0.007183

TMHMM  Annotations      download full data without filtering help

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