logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002310_03060

You are here: Home > Sequence: MGYG000002310_03060

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Microvirga massiliensis
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Microvirga; Microvirga massiliensis
CAZyme ID MGYG000002310_03060
CAZy Family GT51
CAZyme Description Biosynthetic peptidoglycan transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
235 MGYG000002310_4|CGC1 25801.12 11.1304
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002310 8892798 Isolate not provided not provided
Gene Location Start: 401053;  End: 401760  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002310_03060.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT51 51 217 3.6e-49 0.943502824858757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00056 mtgA 4.40e-98 4 217 2 224
monofunctional biosynthetic peptidoglycan transglycosylase; Provisional
TIGR02070 mono_pep_trsgly 3.20e-68 32 216 25 218
monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744 MrcB 1.69e-64 1 216 15 240
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
pfam00912 Transgly 3.28e-63 51 217 10 177
Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
COG5009 MrcA 1.50e-31 50 216 63 230
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRM30044.1 4.28e-101 1 226 1 228
QFU17778.1 1.23e-100 5 224 36 257
ANY81830.1 1.47e-96 15 226 3 216
APF38817.1 2.16e-85 6 224 5 219
ALA17408.1 1.03e-84 6 224 31 245

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U2G_A 2.18e-19 51 198 37 185
2.6Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20],5U2G_B 2.6 Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20]
2OQO_A 4.25e-18 53 198 19 165
Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus]
3NB6_A 4.25e-18 53 198 19 165
Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus]
3DWK_A 2.93e-16 53 187 26 161
ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL]
2OLU_A 7.42e-16 53 187 35 170
StructuralInsight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme [Staphylococcus aureus],2OLV_A Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus],2OLV_B Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q13ED9 3.77e-64 28 215 22 210
Biosynthetic peptidoglycan transglycosylase OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=mtgA PE=3 SV=1
Q2J2T4 1.01e-63 8 215 2 211
Biosynthetic peptidoglycan transglycosylase OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=mtgA PE=3 SV=1
B6IWJ6 4.59e-63 18 216 13 215
Biosynthetic peptidoglycan transglycosylase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=mtgA PE=3 SV=1
B3QBD2 3.05e-62 8 215 12 220
Biosynthetic peptidoglycan transglycosylase OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=mtgA PE=3 SV=1
Q6NCE7 3.05e-62 8 215 12 220
Biosynthetic peptidoglycan transglycosylase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=mtgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
13 35