logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002310_03807

You are here: Home > Sequence: MGYG000002310_03807

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Microvirga massiliensis
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Microvirga; Microvirga massiliensis
CAZyme ID MGYG000002310_03807
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
805 88717.59 6.7314
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002310 8892798 Isolate not provided not provided
Gene Location Start: 420873;  End: 423290  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002310_03807.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT2 169 296 1.6e-16 0.7647058823529411

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04186 GT_2_like_c 7.41e-44 170 380 1 166
Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
COG1216 GT2 3.72e-37 164 431 1 290
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
pfam13692 Glyco_trans_1_4 2.62e-21 621 761 1 138
Glycosyl transferases group 1.
cd03823 GT4_ExpE7-like 4.32e-17 429 791 1 357
glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
cd06433 GT_2_WfgS_like 3.96e-16 169 387 1 202
WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACA90029.1 3.55e-249 77 785 405 1127
APT60175.1 1.93e-246 90 790 394 1109
AXF19841.1 2.29e-243 77 785 437 1159
APH59070.1 2.82e-196 137 798 119 778
APH64140.1 6.10e-196 137 798 123 782

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55465 2.66e-14 161 383 620 850
Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1
Q50864 4.76e-13 161 458 569 871
O-antigen biosynthesis protein RfbC OS=Myxococcus xanthus OX=34 GN=rfbC PE=4 SV=1
P9WMY2 8.52e-13 192 408 27 267
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=wbbL PE=3 SV=2
P9WMY3 8.52e-13 192 408 27 267
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=wbbL PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000049 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002310_03807.