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CAZyme Information: MGYG000002311_01374
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio cholerae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae | |||||||||||
| CAZyme ID | MGYG000002311_01374 | |||||||||||
| CAZy Family | GT5 | |||||||||||
| CAZyme Description | Glycogen synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1543162; End: 1544616 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 5 | 479 | 2.4e-166 | 0.9957627118644068 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02095 | glgA | 0.0 | 4 | 481 | 1 | 473 | glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| COG0297 | GlgA | 0.0 | 5 | 482 | 2 | 479 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| cd03791 | GT5_Glycogen_synthase_DULL1-like | 0.0 | 5 | 479 | 1 | 473 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| PRK00654 | glgA | 0.0 | 5 | 479 | 2 | 461 | glycogen synthase GlgA. |
| PRK14099 | PRK14099 | 3.37e-101 | 1 | 479 | 1 | 477 | glycogen synthase GlgA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SPM15769.1 | 0.0 | 1 | 484 | 1 | 484 |
| ACP09840.1 | 0.0 | 1 | 484 | 1 | 484 |
| ACP05975.1 | 0.0 | 1 | 484 | 1 | 484 |
| ATQ46766.1 | 0.0 | 1 | 484 | 1 | 484 |
| ARB80647.1 | 0.0 | 1 | 484 | 1 | 484 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2QZS_A | 3.56e-78 | 5 | 478 | 2 | 473 | CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12] |
| 3D1J_A | 4.05e-78 | 11 | 478 | 8 | 473 | ChainA, Glycogen synthase [Escherichia coli] |
| 3COP_A | 2.74e-77 | 5 | 478 | 2 | 473 | ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli] |
| 4HLN_A | 9.86e-74 | 5 | 481 | 126 | 625 | Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare] |
| 1RZU_A | 1.87e-73 | 5 | 478 | 2 | 472 | ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9KRB6 | 0.0 | 1 | 484 | 1 | 484 | Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=glgA PE=3 SV=1 |
| C3LN49 | 0.0 | 1 | 484 | 1 | 484 | Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=glgA PE=3 SV=1 |
| A5F7G0 | 0.0 | 1 | 484 | 1 | 484 | Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=glgA PE=3 SV=1 |
| B7VM42 | 5.26e-224 | 5 | 481 | 7 | 483 | Glycogen synthase OS=Vibrio atlanticus (strain LGP32) OX=575788 GN=glgA PE=3 SV=1 |
| Q87QX5 | 6.16e-216 | 5 | 481 | 7 | 483 | Glycogen synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=glgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |