dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002311_01810

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Species

Vibrio cholerae

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae

CAZyme ID

MGYG000002311_01810

CAZy Family

GH73

CAZyme Description

Peptidoglycan hydrolase FlgJ

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
312		34778.71	6.2524

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002311	4089020	Isolate	Haiti	North America

Gene Location

Start: 2017496; End: 2018434 Strand: -

No EC number prediction in MGYG000002311_01810.

Family	Start	End	Evalue	family coverage
GH73	170	305	3.6e-35	0.953125

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05684	flgJ	1.22e-145	1	309	1	300	flagellar assembly peptidoglycan hydrolase FlgJ.
TIGR02541	flagell_FlgJ	1.15e-110	10	306	1	293	flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
COG3951	FlgJ1	2.61e-61	2	178	1	166	Rod binding protein domain [Cell motility].
PRK12709	flgJ	2.91e-58	3	306	5	319	flagellar rod assembly protein/muramidase FlgJ; Provisional
PRK12712	flgJ	4.48e-58	10	306	16	342	flagellar rod assembly protein/muramidase FlgJ; Provisional

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACP10298.1	2.19e-219	1	312	1	312
AAF95337.1	2.19e-219	1	312	1	312
APF68485.1	2.19e-219	1	312	1	312
SPM15366.1	2.19e-219	1	312	1	312
AIT30149.1	2.19e-219	1	312	1	312

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3VWO_A	2.82e-33	163	302	3	142	Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]
2ZYC_A	3.64e-33	163	302	4	143	ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1]
3K3T_A	2.79e-32	163	302	4	143	E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1]
5DN5_A	1.47e-27	164	310	6	152	Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5DN4_A	2.20e-27	164	310	6	152	Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9KQ15	4.03e-219	1	311	1	311	Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2
Q9X9J3	7.35e-125	1	309	1	308	Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=flgJ PE=3 SV=1
Q9I4P4	5.44e-51	17	306	21	385	Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1
P15931	5.62e-42	13	310	14	301	Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1
P75942	5.61e-41	13	310	14	298	Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000048	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000002311_01810.