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CAZyme Information: MGYG000002311_03433

You are here: Home > Sequence: MGYG000002311_03433

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio cholerae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio cholerae
CAZyme ID MGYG000002311_03433
CAZy Family AA10
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
389 MGYG000002311_2|CGC8 42957.81 5.2088
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002311 4089020 Isolate Haiti North America
Gene Location Start: 786538;  End: 787707  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002311_03433.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA10 26 214 9.1e-50 0.9887640449438202

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3397 COG3397 4.83e-110 4 297 10 282
Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only].
pfam03067 LPMO_10 5.52e-60 26 214 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.
cd21177 LPMO_AA10 4.23e-57 26 215 1 180
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 10 (AA10). AA10 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs), which may act on chitin or cellulose. The family used to be called CBM33. Activities in this family include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54), lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56), lytic chitin monooxygenase (EC 1.14.99.53), and lytic xylan monooxygenase/xylan oxidase (glycosidic bond-cleaving) (EC 1.14.99.-). Also included are viral chitin-binding glycoproteins such as fusolin and spheroidin-like proteins.
PHA03387 gp37 6.60e-49 13 216 7 250
spherodin-like protein; Provisional
cd21178 Fusolin-like 7.99e-48 26 216 1 227
fusolin and similar proteins. Fusolin is a protein found in spindles of insect poxviruses that resembles the lytic polysaccharide monooxygenases of chitinovorous bacteria and may function to disrupt the chitin-rich peritrophic matrix that protects insects against oral infections. Thus, it is a component of the virus occlusion bodies (which are large proteinaceous polyhedra) that protect the virus from the outside environment for extended periods until they are ingested by insect larvae.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUY00890.1 1.13e-294 1 389 1 389
APF54288.1 1.13e-294 1 389 1 389
APF77551.1 1.13e-294 1 389 1 389
APF61823.1 1.13e-294 1 389 1 389
ACQ62076.1 1.13e-294 1 389 1 389

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YN1_A 6.49e-25 26 225 1 241
THEATOMIC STRUCTURE OF ANOMALA CUPREA ENTOMOPOXVIRUS (ACEPV) FUSOLIN SPINDLES [Anomala cuprea entomopoxvirus]
4YN2_A 1.09e-23 26 224 1 238
THEATOMIC STRUCTURE OF WISEANA SPP ENTOMOPOXVIRUS (WSEPV) FUSOLIN SPINDLES [unidentified entomopoxvirus]
4OY7_A 2.46e-22 26 218 1 195
Structureof cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_B Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_C Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_D Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_E Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_F Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_G Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_H Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)]
4X27_A 8.69e-21 26 216 1 233
Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Copper) [Entomopoxvirinae],4X29_A Structural basis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Zinc) [Entomopoxvirinae]
4OW5_A 8.78e-21 26 216 1 233
Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles [unidentified entomopoxvirus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9I589 2.74e-34 1 291 1 274
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=cbpD PE=1 SV=1
Q02I11 1.40e-33 1 291 1 274
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=cpbD PE=1 SV=1
Q65328 3.67e-30 14 217 7 249
Spheroidin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=SLP PE=2 SV=1
P23058 2.47e-29 9 216 3 249
Spheroidin-like protein OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=SLP PE=2 SV=1
Q05894 3.81e-26 23 224 18 261
Spindolin OS=Heliothis armigera entomopoxvirus OX=10290 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000284 0.999012 0.000189 0.000173 0.000163 0.000155

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002311_03433.